Cultural Ferment

How to Make Miso at Home: Soybeans, Koji and Salt, Aged for Months

Learn how to make authentic Japanese miso paste at home! This comprehensive guide covers traditional miso fermentation from soybeans, rice koji, and salt. While it requires patience (3-24 months aging), the active work is just a few hours. Discover white, yellow, and red miso varieties, step-by-step instructions with troubleshooting, and how to use your homemade probiotic-rich miso in cooking.

At a glance

To make miso, mash cooked soybeans with rice koji and salt – about 900 g dried soybeans, 900 g koji and 400 g salt, roughly 12% salt overall – pack it tightly into a crock, salt the surface, cover, weight it and leave it somewhere cool. White miso is ready in a few months, yellow in about six to eight and red in one to two years. Discard miso with fuzzy, colored mold.

  • Ingredients: cooked soybeans, koji (Aspergillus oryzae on rice, barley or soybeans) and salt.
  • Two stages: koji enzymes break down starch and protein; salt-tolerant bacteria and yeasts ferment slowly for months.
  • Salt ranges from 6.1 g (sweet white) to 13.0 g (red rice miso) per 100 g.
  • Thin white film is usually film yeast; fuzzy colored mold means discard.
  • Refrigerate or freeze finished miso – it doesn't freeze solid.

Ferment profile

Origin
Japan
Fermentation
Mold / koji
Main microbes
Aspergillus oryzae (koji), then salt-tolerant lactic acid bacteria and yeasts
Live cultures
Depends on preparation
Alcohol
None / trace

Miso (味噌) is Japan’s fermented soybean paste: cooked soybeans mashed with koji – rice, barley or soybeans grown over with the mold Aspergillus oryzae – and salt, then packed into a crock and left for months. It seasons miso soup, marinades, dressings and glazes. Homemade miso, called temae miso, is a long-standing Japanese household tradition, and it’s one of the more forgiving long ferments to make yourself.

How Miso Works

Miso is made in two stages (Allwood et al., 2021). First, the koji mold is grown on grain to make koji, which is full of enzymes. Then the koji is mixed into a salted soybean mash, where over months – up to two years – those enzymes break starch into sugars and protein into amino acids (the savory, umami taste), while salt-tolerant bacteria and yeasts slowly add acidity and aroma. The longer and saltier the fermentation, the darker and stronger the miso.

Types of Miso

  • By koji: rice miso (kome), barley miso (mugi) and soybean miso (mame, such as Nagoya’s dark hatcho-style miso).
  • By color and age: sweet white miso has a high proportion of koji, less salt and a short fermentation; red miso has less koji, more salt and a long one.
  • Salt: Japan’s food tables list sweet white miso at 6.1 g salt per 100 g and red rice miso at 13.0 g (MEXT; MEXT). Miso is a salty seasoning – a tablespoon of red miso holds roughly 2 g of salt.

Korean doenjang is a cousin made from blocks of fermented soybeans rather than koji; see how they compare in our fermented soybean guide. For a quick koji seasoning without soybeans, try shio koji.

Mold, Film and Tamari

Over months, the surface of homemade miso will change. Dark liquid (tamari) seeping up is normal – stir it back in or use it as a seasoning. A thin, flat white film is usually film yeast, which forms where miso touches air: lift it off and the miso below is fine. Fuzzy mold that’s green, blue, black, pink or orange is different. Mold can send roots into soft foods, and USDA advises discarding soft foods with mold rather than cutting it off (USDA). The best defence is prevention: enough salt, a tightly packed paste with no air pockets, a salted surface covered with film and a weight, and a cool spot.

Storing Miso

Once it tastes the way you like, move the miso to clean jars and refrigerate it; Japan’s largest miso maker recommends the fridge or freezer to keep its flavor (Marukome). Miso doesn’t freeze solid, so it can be used straight from the freezer. For how long each type keeps, see how long miso lasts.

In miso soup, stir the miso in after taking the pot off the heat: boiling dulls its aroma, and if your miso is unpasteurized, it also kills its live microbes.

Recipe: Homemade Rice Miso

Makes
About 3.5 kg
Hands-on
300 min
Fermentation
3 months (white) to 12–24 months (red), in a cool place
Salt
About 12% of the total weight (400 g salt for 900 g dried soybeans and 900 g koji)
Temperature
Cool and steady, about 15–21°C (60–70°F)
Difficulty
Moderate

Equipment

  • Large pot or pressure cooker
  • Potato masher or food processor
  • 4–5 litre crock, glass jar or food-grade bucket
  • Plastic film or parchment, a plate and a weight
  • Kitchen scale

Ingredients

  • 900 g dried soybeans (soaked overnight)
  • 900 g rice koji (fresh or dried)
  • 400 g salt (keep about 30 g aside for the surface)
  • As needed soybean cooking liquid (to adjust the texture)

Method

  1. Soak the soybeans in plenty of water for 12–18 hours.
  2. Cook until soft enough to crush easily between two fingers – about 45 minutes in a pressure cooker or 4–5 hours simmering. Keep some cooking liquid.
  3. Mash the beans while warm and let them cool to body temperature.
  4. Rub the koji with the salt (minus the reserved 30 g), then knead it thoroughly into the soybeans, adding cooking liquid until it's as soft as thick peanut butter.
  5. Form balls and throw them hard into the clean crock to drive out air, pressing down after each. Smooth the top and wipe the inside walls with a cloth dipped in strong alcohol.
  6. Sprinkle the reserved salt over the surface, press plastic film or parchment directly onto it, then add a plate and a weight of about a quarter of the miso's weight. Cover and label.
  7. Leave in a cool, steady place. Taste from 3 months; when you like the flavor, pack into jars and refrigerate.
  8. Stir in any dark liquid, lift off a thin white film, and discard the batch if fuzzy green, blue, black, pink or orange mold appears.

Frequently asked questions

How long does homemade miso take?

About 3 months for sweet white miso, 6–8 months for yellow and 12–24 months for red, depending on salt and temperature.

What's the white stuff on my miso?

A thin, flat white film is usually film yeast from contact with air; lift it off. Fuzzy mold in other colors is a reason to discard the batch.

Can I reduce the salt?

A little, for short-aged white miso, but salt is what keeps unwanted microbes out over months. Long-aged miso needs the full amount.

Can you freeze miso paste?

Yes. Because of its salt, miso doesn't freeze solid, so you can scoop it straight from the freezer.

Is miso probiotic?

Unpasteurized miso contains live microbes, but most of its value is as a seasoning, and boiling it kills them. Many commercial misos are pasteurized.

What's the difference between miso and doenjang?

Miso is made with koji (cultivated Aspergillus oryzae); doenjang is made from blocks of soybeans fermented by wild molds and bacteria, giving an earthier, funkier paste.

Do I need koji to make miso?

Yes – koji supplies the enzymes. Dried rice koji is sold in Japanese grocery stores and online.

Sources

  1. Allwood JG, Wakeling LT, Bean DC (2021). Fermentation and the microbial community of Japanese koji and miso: a review. J Food Sci 86(6):2194–2207. Link
  2. MEXT. Standard Tables of Food Composition in Japan: sweet (white) rice miso (17044). Link
  3. MEXT. Standard Tables of Food Composition in Japan: red rice miso (17046). Link
  4. Marukome. How to store miso. Link
  5. USDA FSIS. Molds on food: are they dangerous? Link
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